Tax and compliance

VAT (Value Added Tax) vs PAYE (Pay As You Earn)

Updated June 2026

Verdict

VAT is a tax on sales collected from customers and paid to KRA. PAYE is a tax on employment income deducted from employee salaries. Both are paid to KRA but they are entirely separate obligations collected from different sources.

VAT (Value Added Tax) vs PAYE (Pay As You Earn): feature by feature

VAT (Value Added Tax)PAYE (Pay As You Earn)
Who bears the costThe end customer (you collect it)The employee (you deduct it)
Rate16% standard, some 0% or exemptGraduated bands, up to 35%
Filing frequencyMonthly by the 20thMonthly by the 9th
Applies toVAT-registered businesses above turnover thresholdAny employer with salaried staff
Offset availableYes, input VAT on purchasesPersonal relief and SHIF/NSSF deductions
Non-compliance riskPenalties and interest from KRAPenalties and interest from KRA

More detail

These are not either/or. A business can owe both VAT (on its sales) and PAYE (on its payroll) and must file each separately to KRA on different deadlines.

A POS handles the VAT side automatically on every sale. The PAYE calculator handles the payroll side per employee per month.

Frequently asked questions

Do I pay VAT and PAYE to the same place?
Both go to KRA, but on different returns: VAT on the VAT return, PAYE on the PAYE return, each with its own deadline.
What is the VAT rate in Kenya?
The standard rate is 16%. Some goods and services are zero-rated or exempt.
Who must register for VAT?
Businesses whose taxable turnover exceeds the KRA registration threshold. Confirm the current threshold on the KRA website.

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Terms explained

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